GEPIS Results: Match to SYNGAP1 Save/show results in Excel EST Hits by Libraries Tissue Expression Profiling Extra charts
DesciptionGene Name: SYNGAP1
zinc finger and BTB domain containing 9
SpeciesHUMAN    View Mouse Expression Profile
Genome CoordinatesCHR6:33495824-33533298(+)    Launch UCSC Genome Browser
Gene SynonymsDKFZP761G1421, KIAA1938, Q8TCS2, Q96C00, Q96PV0, Q9UGE2, RASA1, RASA5, SYNGAP, SYNGAP1, ZBTB9
Gene Common Identifiers
AffymetrixHGU133.226163_at, HGU133.230297_x_at, HGU133.234285_at, HGU95.61365_at, HGU95.89674_r_at, HGU95.89675_r_at, Hu35K.RC_AA496961_at
AgilentA_23_P168124, A_23_P8116, A_23_P8119, A_24_P9346
EnsemblENST00000293748, ENST00000335442, ENST00000362090
Entrez Gene221504, 8831
GenBankAL713634
RefSeqNM_006772 (GEO) , NM_152735 (GEO
UniGeneHs.586264, Hs.591805, Hs.594610
UniProtSYGP1_HUMAN, ZBTB9_HUMAN
Gene Orthologs
AffymetrixMGU74.115098_at, MGU74.160644_at, Mouse430.1429125_at, Mouse430.1433904_at
AgilentA_51_P364372, A_52_P314548
EnsemblENSMUST00000053683, ENSMUST00000077186, ENSMUST00000081285
Entrez Gene240057, 474156
GenBankAK014458, AK030262, AK077129, AK154850, AY141192, BC049764, BC049933, BC054732, BC060527
RefSeqNM_001005916 (GEO) , NM_027544 (GEO) , XM_915205 (GEO) , XM_981720 (GEO) , XM_985548 (GEO) , XM_990229 (GEO
UniGeneMm.328888, Mm.328890
UniProtGGNB1_MOUSE, ZBTB9_MOUSE
GENE5168 result Chart

Range (bps): Select All Tissues Unselect All Tissues Reset Default Tissues
Tissues Hits Total Normal NorTotal Tumor TumTotal Nor-DEU Tum-DEU Tum/Nor T/N ztest Tiss Spec ztest(Overall) Tiss Spec ztest(Normal)
ADIPOSE_TISSUE 0 15533 0 13834 0 1699 0.00 0.00 1.00 1 1 1
ADRENAL 0 36922 0 19061 0 17861 0.00 0.00 1.00 1 1 1
BONE 2 52633 0 12668 2 39965 0.00 50.04 1.58 2.13e-1 5.41e-1 1
BONE_MARROW 0 48113 0 20311 0 27802 0.00 0.00 1.00 1 1 1
BRAIN 15 705566 7 515939 8 189627 13.57 42.19 3.11 1.04e-2 7.83e-1 8.74e-1
BREAST 2 195527 1 59033 1 136494 16.94 7.33 0.43 7.29e-1 9.21e-1 7.53e-1
CARTILAGE 0 36300 0 16211 0 20089 0.00 0.00 1.00 1 1 1
CERVIX 0 39427 0 2576 0 36851 0.00 0.00 1.00 1 1 1
COLON 2 221020 1 38203 1 182817 26.18 5.47 0.21 8.89e-1 9.41e-1 6.39e-1
ESOPHAGUS 0 17717 0 87 0 17630 0.00 0.00 1.00 1 1 1
EYE 3 104400 1 52863 2 51537 18.92 38.81 2.05 2.74e-1 6.38e-1 7.26e-1
GENITOURINARY 1 43705 0 9586 1 34119 0.00 29.31 0.84 2.98e-1 6.76e-1 6.76e-1
GI_TRACT 0 43267 0 28590 0 14677 0.00 0.00 1.00 1 1 1
HEAD_N_NECK 3 183837 0 45646 3 138191 0.00 21.71 2.31 1.60e-1 8.30e-1 1
HEART 0 21198 0 21198 0 0 0.00 0 1.00 1 1 1
KIDNEY 0 128658 0 45782 0 82876 0.00 0.00 1.00 1 1 1
LIVER 0 196342 0 108706 0 87636 0.00 0.00 1.00 1 1 1
LUNG 4 219169 0 74876 4 144293 0.00 27.72 4.67 7.48e-2 8.07e-1 1
LYMPHORETICULAR 0 66580 0 19355 0 47225 0.00 0.00 1.00 1 1 1
LYMPH_NODE 1 46659 0 25462 1 21197 0.00 47.18 3.60 1.37e-1 6.93e-1 1
MUSCLE 0 65922 0 34215 0 31707 0.00 0.00 1.00 1 1 1
NERVOUS 0 34602 0 34602 0 0 0.00 0 1.00 1 1 1
OVARY 0 116612 0 8902 0 107710 0.00 0.00 1.00 1 1 1
PANCREAS 2 211295 1 94668 1 116627 10.56 8.57 0.81 5.59e-1 9.34e-1 8.60e-1
PERIPHERAL_NERV 0 21290 0 20092 0 1198 0.00 0.00 1.00 1 1 1
PINEAL_GLAND 0 8534 0 8534 0 0 0.00 0 1.00 1 N/A N/A
PITUITARY_GLAND 0 18649 0 16360 0 2289 0.00 0.00 1.00 1 1 1
PLACENTA 0 219794 0 176385 0 43409 0.00 0.00 1.00 1 1 1
PROSTATE 1 144727 0 60159 1 84568 0.00 11.82 2.13 1.99e-1 9.41e-1 1
RETINA 1 23182 1 23182 0 0 43.14 0 0.00 1 4.59e-1 3.61e-1
SALIVARY_GLAND 0 13568 0 2647 0 10921 0.00 0.00 1.00 1 1 1
SKIN 2 182179 1 44078 1 138101 22.69 7.24 0.32 8.03e-1 9.07e-1 6.78e-1
SPLEEN 0 49015 0 49015 0 0 0.00 0 1.00 1 1 1
STOMACH 0 107774 0 32681 0 75093 0.00 0.00 1.00 1 1 1
SYNOVIUM 0 2542 0 278 0 2264 0.00 0.00 1.00 1 N/A N/A
TESTIS 2 228165 0 95411 2 132754 0.00 15.07 3.59 1.15e-1 9.45e-1 1
THYMUS 0 3099 0 2958 0 141 0.00 0.00 1.00 1 N/A N/A
THYROID 0 78482 0 18650 0 59832 0.00 0.00 1.00 1 1 1
UTERUS 3 174205 0 10151 3 164054 0.00 18.29 0.43 3.33e-1 8.13e-1 1
VASCULAR 0 49393 0 49393 0 0 0.00 0 1.00 1 1 1
Need help? Fri Nov 28 06:22:36 PST 2014